Information for 2-GGAGCGCTCG (Motif 5)

A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G
Reverse Opposite:
A T G C T A C G C T G A A C T G G A T C A T C G G T A C A C G T A T G C A G T C
p-value:1e-7
log p-value:-1.764e+01
Information Content per bp:1.829
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif5.04%
Number of Background Sequences with motif499.2
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets55.5 +/- 24.8bp
Average Position of motif in Background50.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGCTCG
CGGAGC-----
 A C G T A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCGCTCG---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGCTCG
GGGAGGACNG-
 A C G T A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAGCGCTCG-----
TGGCGCGCGCGCCTGA
 A C G T A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGCGCTCG
GGCGCGCT--
 A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAGCGCTCG---
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGAGCGCTCG
-CAGCC----
 A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCGCTCG
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCGCTCG
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGCGCTCG-----
NNAATTCTCGNTNAN
 A C T G A T C G T G C A A C T G A T G C C T A G G T A C G A C T A T G C A T C G A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A