p-value: | 1e-9 |
log p-value: | -2.265e+01 |
Information Content per bp: | 1.943 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 1.06% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 30.5 +/- 10.1bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0047.1_Hoxa11/Jaspar
Match Rank: | 1 |
Score: | 0.76 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATTTTAAGACTTT- NNGTTTTACGACTTTA |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATTTTAAGACTTT- NNNTTTTACGACNTTN |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTTAAGACTTT- ANNATTTTACGACNTNA |
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PH0065.1_Hoxc10/Jaspar
Match Rank: | 4 |
Score: | 0.73 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ATTTTAAGACTTT- ANNTTTTACGACNTNN |
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PH0077.1_Hoxd12/Jaspar
Match Rank: | 5 |
Score: | 0.73 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTTAAGACTTT- NNNATTTTACGACNNTN |
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PB0136.1_IRC900814_2/Jaspar
Match Rank: | 6 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATTTTAAGACTTT---- -TTTTACGACTTTCCAT |
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HOXD12/MA0873.1/Jaspar
Match Rank: | 7 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTTAAGACTTT NTTTTACGACT-- |
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HOXC12/MA0906.1/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTTAAGACTTT NTTTTACGACC-- |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATTTTAAGACTTT NTTTTACGAC--- |
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PH0067.1_Hoxc12/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ATTTTAAGACTTT- GNNNTTTTACGACCTNA |
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