p-value: | 1e-8 |
log p-value: | -1.975e+01 |
Information Content per bp: | 1.868 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 1.02% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 76.5 +/- 14.6bp |
Average Position of motif in Background | 58.2 +/- 20.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0205.1_Zic1_2/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGTGSGGCGCAGCAGG--- ----CCACACAGCAGGAGA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGTGSGGCGCAGCAGG--- ----CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGTGSGGCGCAGCAGG--- ----GAGCACAGCAGGACA |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | CGTGSGGCGCAGCAGG--- -------CACAGCAGGGGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 5 |
Score: | 0.70 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGTGSGGCGCAGCAGG----- ------DCHCAGCAGGRGGCC |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.69 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGTGSGGCGCAGCAGG ------DCTCAGCAGG |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CGTGSGGCGCAGCAGG----- ------NCGCAGCGGGGGGTC |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CGTGSGGCGCAGCAGG----- -------CACAGCGGGGGGTC |
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SCRT2/MA0744.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CGTGSGGCGCAGCAGG--- ------ATGCAACAGGTGG |
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SCRT1/MA0743.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CGTGSGGCGCAGCAGG----- ------GAGCAACAGGTGGTT |
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