Information for 4-AGCGGGGCACCCGGCC (Motif 6)

C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A G T C A C T G C T A G A C T G A C G T A C T G A G T C A G T C A G T C A G T C A C T G T A G C G A C T
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.840
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 23.7bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCGGGGCACCCGGCC
WDNCTGGGCA-------
 A C G T C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCGGGGCACCCGGCC
-NGTGGGCAT------
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGCGGGGCACCCGGCC--
----TGGCACCATGCCAA
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGCGGGGCACCCGGCC--
--CTTGGCANNNTGCCAA
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCGGGGCACCCGGCC
NNNNTTGGGCACNNCN--
 A C G T A C G T C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCGGGGCACCCGGCC-
-GTAGGTCACTGGGTCA
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C A C G T
A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

ESR2/MA0258.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGCGGGGCACCCGGCC--
---AGGTCACCCTGACCT
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGCGGGGCACCCGGCC--
----TGGCAGNCTGCCAG
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCGGGGCACCCGGCC
NNNGGGGCGCCCCCNN
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:AGCGGGGCACCCGGCC-
---------CTAGGCCT
 C G T A A C T G A G T C C T A G A C T G A C T G A C T G A G T C C G T A A G T C A G T C T A G C A C T G A C T G A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T