Information for 4-GCTGSCTGGG (Motif 15)

C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G
Reverse Opposite:
A T G C A T G C T G A C C G T A A C T G A T G C A T G C C G T A A T C G G A T C
p-value:1e-5
log p-value:-1.284e+01
Information Content per bp:1.761
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif6.39%
Number of Background Sequences with motif1072.4
Percentage of Background Sequences with motif2.19%
Average Position of motif in Targets48.8 +/- 26.9bp
Average Position of motif in Background51.3 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCTGSCTGGG
-CTGTCTGG-
 C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCTGSCTGGG--
--WDNCTGGGCA
 C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G A C G T A C G T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCTGSCTGGG
-TWGTCTGV-
 C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGSCTGGG
VBSYGTCTGG-
 A C G T C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGSCTGGG
TGCTGACTCA-
 A C G T C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTGSCTGGG---
TCNCCTGCTGNGNNN
 A C G T A C G T C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCTGSCTGGG----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCTGSCTGGG
----GCTGTG
 C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTGSCTGGG----
RGSMTBCTGGGAAAT
 A C G T C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTGSCTGGG---
NNTCCTGCTGTGNNN
 A C G T A C G T C T A G A T G C C G A T A T C G T A C G G T A C A C G T A C T G A T C G A T C G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C