Information for 1-CTGKGAGYRTTTC (Motif 1)

A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A G C T C T A G A G T C A C G T A G T C G T A C A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.897e+01
Information Content per bp:1.896
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 15.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGKGAGYRTTTC
GCTGTG--------
 A C G T A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTGKGAGYRTTTC-
----GGGAATTTCC
 A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGKGAGYRTTTC-
----GGGAATTTCC
 A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTGKGAGYRTTTC-
----GGGGATTTCC
 A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGKGAGYRTTTC
NNNACCGAGAGTNNN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGKGAGYRTTTC-
--GGGGGTGTGTCC
 A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C A C G T
A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CTGKGAGYRTTTC
CAATCACTGGCAGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGKGAGYRTTTC
CSTGGGAAAD----
 A C G T A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGKGAGYRTTTC
--TTAAGTGCTT-
 A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTGKGAGYRTTTC
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A C G T A C T G C A T G A C T G C G T A A C T G G A C T C T G A A C G T A C G T A C G T A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T