Information for 4-CCAATAGGCG (Motif 4)

G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G
Reverse Opposite:
T A G C A T C G A T G C A T G C A C G T C T G A G A C T A G C T T A C G C T A G
p-value:1e-23
log p-value:-5.399e+01
Information Content per bp:1.538
Number of Target Sequences with motif198.0
Percentage of Target Sequences with motif22.35%
Number of Background Sequences with motif4733.2
Percentage of Background Sequences with motif10.57%
Average Position of motif in Targets52.6 +/- 25.6bp
Average Position of motif in Background50.2 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCAATAGGCG
AGCCAATCGG--
 A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCAATAGGCG-
NTGCCCTTGGGCGN
 A C G T A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCAATAGGCG------
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------CCAATAGGCG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCAATAGGCG---------
GCCASCAGGGGGCGCYVNNG
 A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCAATAGGCG----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCAATAGGCG-------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAATAGGCG--
CGACCAACTGCCGTG
 A C G T A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAATAGGCG
TGCCAA------
 A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCAATAGGCG-----
TGCGCATAGGGGAGGAG
 A C G T A C G T G A T C A G T C T C G A C T G A G A C T T G C A T A C G T A C G T A G C A T C G A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G