Information for 2-TCCCGGCATGCAA (Motif 3)

A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
Reverse Opposite:
A C G T C A G T A C T G A G T C G T C A A G C T A T C G A G T C A G T C A C T G A C T G A C T G C G T A
p-value:1e-24
log p-value:-5.640e+01
Information Content per bp:1.813
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif43.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets58.2 +/- 30.8bp
Average Position of motif in Background53.1 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TCCCGGCATGCAA
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCCCGGCATGCAA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCCCGGCATGCAA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCCCGGCATGCAA
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCCCGGCATGCAA
DCTCAGCAGG---
 A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCCGGCATGCAA--
TACCCACAATGCATTG
 A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGGCATGCAA
TTTCCCAGAAN----
 A C G T A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.61
Offset:-9
Orientation:forward strand
Alignment:---------TCCCGGCATGCAA
AACTACAATTCCCAGAATGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGGCATGCAA
TTCCNGGAAG----
 A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:10
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------TCCCGGCATGCAA
RACTACAACTCCCAGVAKGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G A C T G A T G C C T G A C A G T A C T G A G T C G T C A T G C A
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C A C G T A C G T