Information for 15-CTCTGTCACA (Motif 22)

A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 19.6bp
Average Position of motif in Background43.6 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTCTGTCACA
-CCTGTCAA-
 A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCTGTCACA
-GCTGTCAA-
 A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCTGTCACA
--NTGTCAN-
 A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGTCACA-
TGTCTGDCACCT
 A C G T A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTCTGTCACA-
CTGTCTGTCACCT
 A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCTGTCACA
VGCTGWCAVB
 A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGTCACA---
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCTGTCACA
--YTGWCADY
 A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCTGTCACA----
----GTCACATGAY
 A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTGTCACA-
---TGTCANYT
 A G T C A C G T A G T C A C G T A C T G A C G T G T A C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T