Information for 1-TGGGAVTTGTAGT (Motif 1)

A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T
Reverse Opposite:
T C G A A G T C G A C T T G C A A G T C T C G A C G T A A G T C A G C T G A T C G A T C A G T C C T G A
p-value:1e-196
log p-value:-4.524e+02
Information Content per bp:1.678
Number of Target Sequences with motif178.0
Percentage of Target Sequences with motif20.09%
Number of Background Sequences with motif304.4
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets50.1 +/- 25.2bp
Average Position of motif in Background49.9 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:TGGGAVTTGTAGT
-GGGAATTGTAGT
 A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.89
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAVTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.85
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAVTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGGGAVTTGTAGT---
----NNHTGTGGTTWN
 A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAVTTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAVTTGTAGT
CSTGGGAAAD-----
 A C G T A C G T A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGGAVTTGTAGT--
-----GCTGTGGTTT
 A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TGGGAVTTGTAGT---
------CTGTGGTTTN
 A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGGGAVTTGTAGT--
-----NNTGTGGTTT
 A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGGAVTTGTAGT
TGGGGA--------
 A C G T A G C T C T A G C T A G C T A G C T G A T C A G G C A T A G C T C T A G A C G T C T G A T A C G A C G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T