Information for 18-GAGSGWKTAAGAA (Motif 36)

C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A
Reverse Opposite:
A G C T A G C T A G T C G A C T A G C T G C T A G T C A C G A T A G T C T A G C A G T C A C G T G A T C
p-value:1e-6
log p-value:-1.593e+01
Information Content per bp:1.658
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif338.5
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets46.9 +/- 24.4bp
Average Position of motif in Background49.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF1/MA0486.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGSGWKTAAGAA
GAACGTTCTAGAA
 C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGSGWKTAAGAA
GAANGTTCTAGAA
 C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGSGWKTAAGAA-
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGSGWKTAAGAA
GAANNTTCTAGAA
 C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGSGWKTAAGAA--
BAGTCATANTGAAAG
 C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGSGWKTAAGAA----
WNAGTCADAVTGAAACTN
 A C G T C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGSGWKTAAGAA
TAGAANVTTCTAGAA
 A C G T A C G T C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGSGWKTAAGAA--
ACAAGCAATTAATGAAT
 A C G T A C G T C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGSGWKTAAGAA--
ACAAGCAATTAATGAAT
 A C G T A C G T C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGSGWKTAAGAA--
ACAAGCAATTAAAGAAT
 A C G T A C G T C T A G G T C A T A C G A T C G T C A G C G T A C A G T C G A T T C G A C T G A C T A G T C G A C T G A A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T