Information for 4-GTTGCAACAYGTG (Motif 6)

A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
Reverse Opposite:
G T A C G T C A G T A C C T G A A C G T A C T G A G C T C A G T A C T G A G T C C G T A C T G A T A G C
p-value:1e-14
log p-value:-3.390e+01
Information Content per bp:1.660
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets56.5 +/- 23.9bp
Average Position of motif in Background54.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GTTGCAACAYGTG-
-ATGCAACAGGTGG
 A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G A C G T
A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTTGCAACAYGTG
-TTGCAACATN--
 A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTTGCAACAYGTG---
-GAGCAACAGGTGGTT
 A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G A C G T A C G T A C G T
A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTTGCAACAYGTG
CAATTGCAAAAATAT
 A C G T A C G T A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTGCAACAYGTG
ATTGCATCAK---
 A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T

TP63/MA0525.2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGCAACAYGTG
GACATGTCCCAACATGTT
 A C G T A C G T A C G T A C G T A C G T A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
C A T G C T G A A G T C C T G A G C A T A C T G G A C T G A T C T G A C A G T C C T G A C T G A A G T C C G T A G A C T A C T G G A C T G A C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTGCAACAYGTG
ATTGCATCAT---
 A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTTGCAACAYGTG--
-----AACACGTGTT
 A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTGCAACAYGTG
ATTGCACAATA--
 A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCAACAYGTG
NCCGTTGCTANGNGN-
 A C G T A C G T A C G T A T C G A G C T A C G T C T A G A G T C G T C A C T G A G T A C T C G A A G C T A C T G C A G T C A T G
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T