Information for 25-TGGYGGGTGCCGA (Motif 41)

A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C C T A G A C T G A G T C C G T A A G T C A G T C A G T C C T A G A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.939
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 28.4bp
Average Position of motif in Background45.3 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGGYGGGTGCCGA--
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

HES7/MA0822.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGGYGGGTGCCGA
TGGCACGTGCCA-
 A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T

HES5/MA0821.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGYGGGTGCCGA
TGGCACGTGCCG-
 A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGYGGGTGCCGA
SDGCAGGTGCNS-
 A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGYGGGTGCCGA-----
--GGGTGTGCCCAAAAGG
 A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGYGGGTGCCGA
GTGCCGTGTGCAAA
 A C G T A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGYGGGTGCCGA
NTCGGTGGTCGC---
 A C G T A C G T A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGGYGGGTGCCGA
GTGGGGGGGG----
 A C G T A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGYGGGTGCCGA
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGYGGGTGCCGA--
-----GGTGCCAAGT
 A C G T A C T G A C T G G A C T A C T G A C T G A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T