Information for 3-TTTCAAATGGACCAAT (Motif 4)

C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C T A G A C T G A G C T A G T C A T G C T C G A A C G T A G C T A G C T A C T G C G T A C G T A C G T A
p-value:1e-22
log p-value:-5.098e+01
Information Content per bp:1.927
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.9 +/- 20.3bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TTTCAAATGGACCAAT---
----AAATGGACCAATCAG
 C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTTCAAATGGACCAAT
CGGTTTCAAA---------
 A C G T A C G T A C G T C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTTCAAATGGACCAAT--
----TTATGTACTAATAA
 C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTCAAATGGACCAAT
NATTCAAAT--------
 A C G T C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TTTCAAATGGACCAAT---------
-------TGGACCAATCAGCACTCT
 C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAAATGGACCAAT
NANTTTCAAGTGGTTAN--
 A C G T A C G T A C G T C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAAATGGACCAAT
AAATTCAAGTGGNTTN--
 A C G T A C G T C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TTTCAAATGGACCAAT---
---------AGCCAATCGG
 C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTTCAAATGGACCAAT--
------ACTAGCCAATCA
 C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAAATGGACCAAT
AANTTCAAGTGGCTTN--
 A C G T A C G T C G A T A C G T A C G T A G T C C T G A C T G A C G T A A G C T A T C G C T A G C T G A A G T C A G T C C G T A C G T A A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T