Information for 20-CSGAAKMGCCMRYTGG (Motif 36)

A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C T A G A G C T A C T G A C T G A C T G A G T C C A T G G T A C A C G T A C G T A G T C A T G C A C T G
p-value:1e-6
log p-value:-1.451e+01
Information Content per bp:1.856
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 32.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CSGAAKMGCCMRYTGG
CCGGAAGTGGC------
 A C G T A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CSGAAKMGCCMRYTGG
-GGAAANCCCC-----
 A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CSGAAKMGCCMRYTGG
NCCGGAAGTGG-------
 A C G T A C G T A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CSGAAKMGCCMRYTGG
RCCGGAAGTD--------
 A C G T A C G T A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CSGAAKMGCCMRYTGG---
-----CCGCCCAAGGGCAG
 A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CSGAAKMGCCMRYTGG---
-------GCCAGCTGBTNB
 A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CSGAAKMGCCMRYTGG
RCCGGAARYN--------
 A C G T A C G T A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CSGAAKMGCCMRYTGG
-GGAAATCCCC-----
 A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CSGAAKMGCCMRYTGG---
----CACGGCAGTTGGTNN
 A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CSGAAKMGCCMRYTGG--
--------CCGATTGGCT
 A G T C A T C G A C T G C G T A C G T A A C T G G T A C A C T G A G T C A G T C G T A C C T G A A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T