Information for 13-GCGATTAAGC (Motif 32)

A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A C G T C G T A C G T A A G C T A G T C A C T G A G T C
p-value:1e-6
log p-value:-1.463e+01
Information Content per bp:1.945
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 25.8bp
Average Position of motif in Background21.0 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGATTAAGC
ACCGATTAG--
 A C G T A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCGATTAAGC---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCGATTAAGC---
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCGATTAAGC
CGGATTAN--
 A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCGATTAAGC
GCAATTAG--
 A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCGATTAAGC---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCGATTAAGC
GGGATTANN-
 A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCGATTAAGC
GGGATTAA--
 A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCGATTAAGC
CCAATTAA--
 A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCGATTAAGC
GNGGATTAGN-
 A C G T A C T G A G T C A C T G C T G A A C G T A C G T C G T A C G T A A T C G A G T C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T