Information for 3-KNNVDTTYRAAYS (Motif 3)

A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C
Reverse Opposite:
T A C G C T A G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A G T C C T A G G T C A T G A C
p-value:1e-22
log p-value:-5.296e+01
Information Content per bp:1.610
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif11.43%
Number of Background Sequences with motif1461.2
Percentage of Background Sequences with motif3.02%
Average Position of motif in Targets48.7 +/- 24.8bp
Average Position of motif in Background48.7 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:KNNVDTTYRAAYS
---NATTCAAAT-
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:KNNVDTTYRAAYS
-CGGTTTCAAA--
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:KNNVDTTYRAAYS---
-AGNGTTCTAATGANN
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C A C G T A C G T A C G T
A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:KNNVDTTYRAAYS
-----ATTAAA--
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:KNNVDTTYRAAYS
---ACATCAAAGG
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:KNNVDTTYRAAYS
---TATGCAAAT-
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:KNNVDTTYRAAYS--
---WATGCAAATGAG
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KNNVDTTYRAAYS----
TATAGATCAAAGGAAAA
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KNNVDTTYRAAYS-
NNTTTTTCTTATNT
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KNNVDTTYRAAYS----
TATAGATCAAAGGAAAA
 A C T G C A G T G A T C T A C G C A T G A C G T A C G T A G C T C T G A C G T A C G T A G A T C A T G C A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A