Information for 12-ACAGTGCAGC (Motif 28)

C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C C G T A G T A C A C G T A C T G A C G T
p-value:1e-6
log p-value:-1.607e+01
Information Content per bp:1.927
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif52.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets39.8 +/- 20.0bp
Average Position of motif in Background50.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTGCAGC--
GHTACAWTGTADCHR
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ACAGTGCAGC-
------CAGCC
 C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGCAGC------
NNNANTGCAGTGCNNTT
 A C G T C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTGCAGC--
GHWACAWTGTWDCWA
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACAGTGCAGC
RCATTCCWGG
 C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACAGTGCAGC--
ACAAAGGNBCCT
 C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGCAGC
GACAATGNN--
 A C G T C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGCAGC----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGCAGC
CACAGN-----
 A C G T C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACAGTGCAGC
ACAAAG----
 C G T A A G T C C G T A A C T G A C G T C T A G G T A C C G T A A C T G A G T C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T