Information for 11-TCACACGTGT (Motif 27)

G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T
Reverse Opposite:
T G C A G A T C C G T A G A T C C T A G C A G T C A T G C G A T A T C G C G T A
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.670
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif218.6
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets41.9 +/- 26.8bp
Average Position of motif in Background50.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TCACACGTGT-
-AACACGTGTT
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T A C G T
A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TCACACGTGT-
-NACACGTGCN
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TCACACGTGT-
---CACGTGBN
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:TCACACGTGT
---CACGTG-
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T
A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TCACACGTGT
--ACACGTGC
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TCACACGTGT-
---CACGTGDC
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T A C G T
A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TCACACGTGT-
---CACGTGNC
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TCACACGTGT-
--ACACGTGGC
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T A C G T
A C G T A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCACACGTGT
TCACACCT--
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TCACACGTGT-
-GACACGTGCC
 G C A T T A G C G C T A G T A C G T C A G A T C C T A G G C A T C T A G A C G T A C G T
A C G T T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C