Information for 12-TGGAVTCCCCGAG (Motif 21)

A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T G T A C A T C G A C T G A C T G A C T G C G T A A G T C A G C T A G T C A G T C G T C A
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.824
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.8 +/- 27.3bp
Average Position of motif in Background46.8 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGGAVTCCCCGAG
GGGGGAATCCCC---
 A C G T A C G T A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGAVTCCCCGAG
AGGGGAATCCCCT--
 A C G T A C G T A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGAVTCCCCGAG
AGGGGAATCCCCT--
 A C G T A C G T A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGGAVTCCCCGAG
-----TCCCCA--
 A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGGAVTCCCCGAG
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGGAVTCCCCGAG
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGAVTCCCCGAG
GGAAATCCCC---
 A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGAVTCCCCGAG
-GGAAANCCCC--
 A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGGAVTCCCCGAG
NGGGGATTTCCC---
 A C G T A C G T A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGAVTCCCCGAG
GGGAATTTCC---
 A C G T A C T G A C T G C T G A T A C G A C G T A G T C G T A C A G T C A T G C A C T G C G T A C T A G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T