Information for 9-CGATTGGCTA (Motif 22)

A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A
Reverse Opposite:
A G C T C G T A C A T G A G T C A G T C C G T A C G T A C G A T A T G C T A C G
p-value:1e-7
log p-value:-1.615e+01
Information Content per bp:1.861
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif78.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets43.7 +/- 27.8bp
Average Position of motif in Background46.3 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CGATTGGCTA--
TGATTGGCTANN
 A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTA
CCGATTGGCT-
 A C G T A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTA----
CTGATTGGTCNATTT
 A C G T A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTA
---TTGGCA-
 A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGATTGGCTA-
--NTTGGCANN
 A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CGATTGGCTA-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTA-
---TWGTCTGV
 A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTA
TTGATTGN---
 A C G T A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CGATTGGCTA-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGATTGGCTA--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A T G C A T C G C G T A A C G T A C G T A C T G A C T G G T A C A C G T C T G A A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G