Information for 9-AAACTGTTAG (Motif 11)

C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A G T C C G T A A C T G C G A T A C G T A C G T
p-value:1e-5
log p-value:-1.359e+01
Information Content per bp:1.961
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.0 +/- 34.4bp
Average Position of motif in Background66.2 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAACTGTTAG
AAACMATTAN
 C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AAACTGTTAG---
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAACTGTTAG---
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAACTGTTAG
NHAACBGYYV-
 A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAACTGTTAG
CCAACTGCCA-
 A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAACTGTTAG
AAGGTGTKAA
 C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAACTGTTAG---
AAAATTGTTATGAA
 A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAACTGTTAG---
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAACTGTTAG--
AAAAACCATTAAGG
 A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAACTGTTAG
-AACCGANA-
 C G T A C G T A C G T A A G T C A C G T A C T G A C G T A C G T C G T A A C T G
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T