Information for 5-GAGVGGWAACTGCAGK (Motif 3)

T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
Reverse Opposite:
T G C A G T A C A C G T A T C G G A T C C T G A C A T G A C G T G C A T G C A T A G T C G T A C A G C T T G A C A G C T A G T C
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.694
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 13.1bp
Average Position of motif in Background69.4 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGVGGWAACTGCAGK-
--GAAAAAATTGCAAGG
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T A C G T
A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GAGVGGWAACTGCAGK
------AAACCGCAA-
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAGVGGWAACTGCAGK
-----NAAACCACAG-
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GAGVGGWAACTGCAGK
------AAACCGCAAA
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGVGGWAACTGCAGK---
--AATCGCACTGCATTCCG
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GAGVGGWAACTGCAGK
TGGCCANNNNNGGAACTGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGVGGWAACTGCAGK
------AAACCACANN
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGVGGWAACTGCAGK
GGGGTCAAAGTCCAAT
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAGVGGWAACTGCAGK---
----TNGAATTTCATTNAN
 T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGVGGWAACTGCAGK
GAGAACCGAAACTG----
 A C G T A C G T T C A G C T G A A C T G T C G A C A T G C T A G C G T A C G T A T G C A G A T C A G C T C T A G A T G C C G T A C A T G A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T A C G T