Information for 8-TGTGTCTCCMTGKKTW (Motif 8)

C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
Reverse Opposite:
C G A T C T G A T G A C G T C A A G T C C T G A A C G T A C T G A C T G C T G A A T C G C G T A A T G C G T C A A T G C C G T A
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.712
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.7 +/- 17.7bp
Average Position of motif in Background51.1 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTCTCCMTGKKTW
NTNNCGTATCCAAGTNN-
 A C G T A C G T C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGTGTCTCCMTGKKTW
----TCCCCA------
 C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTGTCTCCMTGKKTW
--NGTTGCCATGGCAA
 C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TGTGTCTCCMTGKKTW-
-------CCATGTGCTT
 C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTCTCCMTGKKTW---
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGTGTCTCCMTGKKTW
--GGTTGCCATGGCAA
 C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGTGTCTCCMTGKKTW
NNNGTAACTANGNNA-
 C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T

RFX4/MA0799.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTGTCTCCMTGKKTW--
--CGTTGCCATGGCAACN
 C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A A C G T A C G T
A C G T A C G T A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGTGTCTCCMTGKKTW
GGGTGTGCCCAAAAGG-
 A C G T C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGTGTCTCCMTGKKTW
--BNTGDCCTTG----
 C G A T A T C G C A G T T A C G A C G T A T G C G A C T A G T C A G T C G T C A A G C T C T A G A C G T A C T G A G C T C G T A
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T