Information for 3-CAAGTTCCAGAGA (Motif 3)

A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A G T C A C G T A C T G A T C G C G T A G T C A A G T C A C G T A C G T A C T G
p-value:1e-12
log p-value:-2.992e+01
Information Content per bp:1.941
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 21.0bp
Average Position of motif in Background30.8 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAGTTCCAGAGA---
-CATTTCCTGAGAAAT
 A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAAGTTCCAGAGA-
----TTCCKNAGAA
 A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A A C G T
A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTTCCAGAGA-
BCNGGTTCTAGANCN
 A C G T A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAAGTTCCAGAGA-
--ANTTCTNNAGAA
 A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A A C G T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAGTTCCAGAGA--
CTAAGGTTCTAGATCAC
 A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAAGTTCCAGAGA
-AGGTGHCAGACA
 A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAGTTCCAGAGA
---ATGCCAGACN
 A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAGTTCCAGAGA-----
-CAAATCCAGACATCACA
 A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAAGTTCCAGAGA-
-AGGTGNCAGACAG
 A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTTCCAGAGA
GAANGTTCTAGAA-
 A C G T A G T C C G T A C G T A A C T G A C G T A C G T T A G C A G T C C G T A A C T G C G T A A C T G C T G A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T