Information for 5-YSCCTKGGSRGCCRGC (Motif 7)

A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
Reverse Opposite:
C T A G A G T C A G C T A C T G A C T G A G T C A G C T A T C G A G T C A G T C T G C A C T G A A C T G A C T G A T C G C T G A
p-value:1e-12
log p-value:-2.796e+01
Information Content per bp:1.850
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 23.5bp
Average Position of motif in Background76.0 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YSCCTKGGSRGCCRGC
TCCCNNGGGACN----
 A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YSCCTKGGSRGCCRGC
GTCCCCAGGGGA------
 A C G T A C G T A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YSCCTKGGSRGCCRGC
WDNCTGGGCA------
 A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YSCCTKGGSRGCCRGC
TTGCCATGGCAACN---
 A C G T A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:YSCCTKGGSRGCCRGC---
-----TGGCAGNCTGCCAG
 A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--YSCCTKGGSRGCCRGC
GCACCCCTGGGTGCC---
 A C G T A C G T A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--YSCCTKGGSRGCCRGC
ANTCCCTNGGGAAT----
 A C G T A C G T A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--YSCCTKGGSRGCCRGC
CACCCCCGGGGGGG----
 A C G T A C G T A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:YSCCTKGGSRGCCRGC---
---CTTGGCANNNTGCCAA
 A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---YSCCTKGGSRGCCRGC
ACCCCCCCGGGGGGN----
 A C G T A C G T A C G T A G C T A T G C A G T C A G T C A G C T A C G T A C T G A C T G A T G C C T G A A C T G A G T C A G T C C T G A A C T G A G T C
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T