Information for 6-CTTACGCATGAAC (Motif 4)

A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C G T C A A C G T A C T G G A T C A T C G A C G T C T G A C G T A A C T G
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 18.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTACGCATGAAC-
TTCACGCATGAGTT
 A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

FOS/MA0476.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTACGCATGAAC
TGTGACTCATT---
 A C G T A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTTACGCATGAAC
-GTGCGCATGCGC
 A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTTACGCATGAAC
GHATATKCAT----
 A C G T A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTTACGCATGAAC
GAATATTCAT----
 A C G T A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTTACGCATGAAC
NNVTGASTCATN---
 A C G T A C G T A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C A C G T A C G T A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTTACGCATGAAC
TGCTGAGTCATC---
 A C G T A C G T A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTTACGCATGAAC
NNATGASTCATH---
 A C G T A C G T A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTTACGCATGAAC
-TTAATNATTAAC
 A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTTACGCATGAAC
-CTGCGCATGCGC
 A G T C A C G T A G C T C G T A A T G C C A T G A G T C C G T A A C G T A C T G T G C A G T C A A G T C
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C