Information for 2-CKNGKCTGGCCTGTGC (Motif 3)

A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A G T C C G T A A T C G A C T G A G T C A G T C C G T A A C T G G T A C A G T C C A G T G T A C A T C G
p-value:1e-16
log p-value:-3.779e+01
Information Content per bp:1.812
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 26.4bp
Average Position of motif in Background53.3 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CKNGKCTGGCCTGTGC
-GGGGCTYGKCTGGGA
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CKNGKCTGGCCTGTGC
-----CTGACCTTTG-
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CKNGKCTGGCCTGTGC
----CNAGGCCT----
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CKNGKCTGGCCTGTGC
--GGTCTGGCAT----
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CKNGKCTGGCCTGTGC
GGGGCCGAGGCCTG---
 A C G T A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.55
Offset:9
Orientation:forward strand
Alignment:CKNGKCTGGCCTGTGC
---------GCTGTG-
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CKNGKCTGGCCTGTGC
-TWGTCTGV-------
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CKNGKCTGGCCTGTGC--
------TGGCACGTGCCA
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CKNGKCTGGCCTGTGC
-CTGTCTGG-------
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CKNGKCTGGCCTGTGC
------AGGCCTAG--
 A T G C A C T G G A C T A C T G A C T G A G T C G A C T C T A G A C T G A G T C A T G C A C G T A C T G C G A T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T