Information for 6-GTAATTACTG (Motif 5)

T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G
Reverse Opposite:
T A G C C G T A A C T G C G A T C G T A C T G A A C G T A C G T C G T A A G T C
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.842
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.3 +/- 24.0bp
Average Position of motif in Background54.9 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0062.1_Hoxb7/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---GTAATTACTG---
GTAGTAATTAATGCAA
 A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T A C G T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0072.1_Hoxc8/Jaspar

Match Rank:2
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTACTG-
TTGGGGTAATTAACGT
 A C G T A C G T A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:3
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTACTG-
TATTGGTAATTACCTT
 A C G T A C G T A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTACTG--
TCGCGATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

MEOX1/MA0661.1/Jaspar

Match Rank:5
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GTAATTACTG
GNTAATTAGN-
 A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:6
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GTAATTACTG
NTTAATTACN-
 A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:7
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GTAATTACTG---
GTAGTAATTAATGGAA
 A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

PH0023.1_Dlx4/Jaspar

Match Rank:8
Score:0.81
Offset:-5
Orientation:forward strand
Alignment:-----GTAATTACTG--
GCGCTATAATTACCGAC
 A C G T A C G T A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

PH0039.1_Mnx1/Jaspar

Match Rank:9
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---GTAATTACTG---
GTACTAATTAGTGGCG
 A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

PH0053.1_Hoxa6/Jaspar

Match Rank:10
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----GTAATTACTG-
NTNAGGTAATTACCTT
 A C G T A C G T A C G T A C G T A C G T T C A G A C G T C G T A C G T A A G C T A C G T C G T A A G T C C G A T A T C G A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T