Information for 4-AGAGGGCGCTGTCTGC (Motif 2)

C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
Reverse Opposite:
C T A G A G T C G T C A C T A G G T C A A G T C C T G A A C T G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T
p-value:1e-21
log p-value:-4.864e+01
Information Content per bp:1.911
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.9 +/- 17.3bp
Average Position of motif in Background59.8 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCGCTGTCTGC
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGGCGCTGTCTGC
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:8
Orientation:forward strand
Alignment:AGAGGGCGCTGTCTGC
--------CTGTCTGG
 C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGAGGGCGCTGTCTGC
------VBSYGTCTGG
 C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------AGAGGGCGCTGTCTGC
TGGCCACCAGGTGGCACTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------AGAGGGCGCTGTCTGC
TGGCCACCAGGGGGCGCTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGGCGCTGTCTGC
NAAGGGGGCGTGGCTTN-
 A C G T A C G T C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGGCGCTGTCTGC
NANAAGGGCGTGGTC---
 A C G T A C G T C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAGGGCGCTGTCTGC
----GGCGCGCT----
 C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTCTGC
NNAGGGGCGGGGTNNA-
 A C G T C G T A A C T G C T G A C A T G A C T G A C T G A G T C A C T G A G T C A G C T T A C G A C G T A G T C A C G T C T A G A G T C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T