Information for 4-CCAGCTGCGGCCCCRG (Motif 4)

A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
Reverse Opposite:
A T G C A G C T A T C G A T C G T A C G A C T G T G A C T A G C A T C G A T G C T C G A A T C G A T G C A C G T A C T G A T C G
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.735
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif97.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets46.8 +/- 29.3bp
Average Position of motif in Background50.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCAGCTGCGGCCCCRG
NCAGCTGCTG------
 A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGCGGCCCCRG
AGCAGCTGCTNN-----
 A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGCGGCCCCRG
TGCAGCTGTCCCT----
 A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCTGCGGCCCCRG
CGCAGCTGCG-------
 A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTGCGGCCCCRG
NNACAGCTGC--------
 A C G T A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCTGCGGCCCCRG
NNGCAGCTGTC-------
 A C G T A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAGCTGCGGCCCCRG
CTCAGCAGCTGCTACTG---
 A C G T A C G T A C G T A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCAGCTGCGGCCCCRG
NNVVCAGCTGBN-------
 A C G T A C G T A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCAGCTGCGGCCCCRG
-CAGCTGNT-------
 A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTGCGGCCCCRG
AGCAGCTGCT-------
 A C G T A T G C A G T C C G T A A T C G A T G C A G C T A T C G A T G C A T C G A C T G A G T C A T G C A T G C A T G C T C G A A T C G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T