Information for 5-CCCTGCTGGGTCT (Motif 14)

A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
Reverse Opposite:
C T G A C T A G T C G A A G T C A T G C G T A C T C G A A T C G A G T C T C G A A C T G T C A G A T C G
p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.686
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif382.4
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets50.1 +/- 22.9bp
Average Position of motif in Background50.3 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGGGTCT
CCCCCTGCTGTG---
 A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCTGGGTCT
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGGGTCT
TCNCCTGCTGNGNNN
 A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCTGCTGGGTCT
-CCTGCTGAGH--
 A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGGGTCT
TNTCCTGCTGTGNNG
 A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGGGTCT
NNTCCTGCTGTGNNN
 A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCTGGGTCT
GACCCCCCGCTGCGC--
 A C G T A C G T A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCTGGGTCT
GACCCCCCGCTGTG---
 A C G T A C G T A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCTGGGTCT
GACCCCCCGCTGTGC--
 A C G T A C G T A C G T A C G T A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTGCTGGGTCT-
--HTGCTGAGTCAT
 A T G C A G T C T G A C A G C T T C A G A T G C A G C T C A T G T A C G T A C G A G C T A G T C G A C T A C G T
A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T