Information for 9-TGTATATATA (Motif 17)

C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A
Reverse Opposite:
A C G T G T C A G C A T C T G A C G A T C G T A G A C T G T C A T G A C G T C A
p-value:1e-4
log p-value:-9.557e+00
Information Content per bp:1.535
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif14.87%
Number of Background Sequences with motif4986.9
Percentage of Background Sequences with motif10.43%
Average Position of motif in Targets53.8 +/- 25.7bp
Average Position of motif in Background49.5 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TGTATATATA----
ANNNGGATATATCCNNN
 A C G T A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGTATATATA--
TGTATATATATACC
 A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TGTATATATA----
NANTTATATATAANGN
 A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGTATATATA-
NTGTTTAYATWW
 A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTATATATA
CBTGTTTAYAWW
 A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTATATATA
TATGTAAATAT-
 A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGTATATATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGTATATATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGTATATATA---
YATGCATATRCATRT
 A C G T A C G T C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A A C G T A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTATATATA
TGTTTATTT-
 C A G T A C T G C A G T C T G A G C A T G C T A G A C T C G T A C A G T T G C A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T