Information for 6-CCGGACCCTG (Motif 12)

G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G
Reverse Opposite:
A T G C G T C A C T A G A C T G C T A G A C G T A G T C G A T C T C A G A C T G
p-value:1e-7
log p-value:-1.788e+01
Information Content per bp:1.833
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif206.6
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets50.5 +/- 28.0bp
Average Position of motif in Background50.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCGGACCCTG
NCGCGGACGTTG
 A C G T A C G T G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGGACCCTG-
-AAGACCCYYN
 G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G A C G T
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCGGACCCTG
BNTGDCCTTG
 G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGGACCCTG--
--TGACCTTGAV
 G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCGGACCCTG----
NNNNTGACCCGGCGCG
 A C G T A C G T G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCGGACCCTG
RCCGGAARYN-
 A C G T G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGGACCCTG--
--TGACCTTGAN
 G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCGGACCCTG
--TGACCT--
 G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCGGACCCTG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGGACCCTG-----
GCTGACCTTGAACTN
 G T A C A G T C C T A G A C T G T G C A A G T C G T A C A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T