Information for 11-ATGTTAGAAG (Motif 27)

C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A A C G T
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.3 +/- 12.5bp
Average Position of motif in Background49.3 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ATGTTAGAAG-
-----NGAAGC
 C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATGTTAGAAG---
TATCATTAGAACGCT
 A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAGAAG
NATGTTGCAA-
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATGTTAGAAG----
TGATTGTTAACAGTTGG
 A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATGTTAGAAG----
NAATTTTACGAGNTNN
 A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATGTTAGAAG
NTTTCTNAGAAA
 A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTAGAAG-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATGTTAGAAG----
ANATTTTACGAGNNNN
 A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGTTAGAAG-
NTTTTACGAGN
 C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATGTTAGAAG
TAGGTGTGAAG
 A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G C G T A C G T A A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G