Information for 10-ARGGCCCTGCCACYTA (Motif 8)

C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
Reverse Opposite:
A C G T G T C A T C A G A T C G C G A T A C T G A C T G A G T C C T G A A C T G C T A G A C T G T A G C A G T C G A T C C G A T
p-value:1e-12
log p-value:-2.860e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 27.4bp
Average Position of motif in Background59.4 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ARGGCCCTGCCACYTA
--GGCCCCGCCCCC--
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ARGGCCCTGCCACYTA
-NAGCCCCGCCCCCN-
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ARGGCCCTGCCACYTA-
TACGCCCCGCCACTCTG
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ARGGCCCTGCCACYTA
---GCCCCGCCCCC--
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ARGGCCCTGCCACYTA--
---GCCCCGCCCCCTCCC
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A A C G T A C G T
A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ARGGCCCTGCCACYTA
---GCTCCGCCCMCY-
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ARGGCCCTGCCACYTA
-----CTTGGCAA---
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ARGGCCCTGCCACYTA
----VGCTGWCAVB--
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:ARGGCCCTGCCACYTA
-------TGCCAA---
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ARGGCCCTGCCACYTA
-----CGTGCCAAG--
 C G T A C T A G C T A G A T C G A G T C A G T C A G T C A G C T A C T G A G T C A G T C C G T A A T G C A G C T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T