Information for 6-CTGGCCCCACAGGMAC (Motif 5)

A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T A G T C G T A C A C G T A C T G G C A T C T A G T C A G A C T G A C T G A G T C A G T C C G T A A C T G
p-value:1e-14
log p-value:-3.298e+01
Information Content per bp:1.787
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.3 +/- 22.1bp
Average Position of motif in Background66.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCCCCACAGGMAC
NTTGGCANN--------
 A C G T A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGGCCCCACAGGMAC
TTGGCA----------
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGCCCCACAGGMAC
-GAGCACAGCAGGACA
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGGCCCCACAGGMAC
-TGWCCTCARNTGACC
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTGGCCCCACAGGMAC-
-------NACAGGAAAT
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCCCACAGGMAC
GGTCTGGCAT---------
 A C G T A C G T A C G T A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGGCCCCACAGGMAC
-CCACACAGCAGGAGA
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CTGGCCCCACAGGMAC--
--------ACAGGAAGTG
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTGGCCCCACAGGMAC
-CCACACAGCAGGAGA
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CTGGCCCCACAGGMAC-
-------AACAGGAAGT
 A G T C A C G T C T A G A C T G A G T C G T A C A G T C A G T C C G T A A G T C C G T A A C T G C T A G G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T