Information for 18-AGACACATATCCACAC (Motif 43)

C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C
Reverse Opposite:
T A C G A C G T C T A G A C G T C T A G A C T G C T G A A C G T T C G A G C A T C T A G A C G T C A T G A C G T G T A C A C G T
p-value:1e-3
log p-value:-9.063e+00
Information Content per bp:1.667
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 6.0bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.58
Offset:8
Orientation:forward strand
Alignment:AGACACATATCCACAC
--------ATCCAC--
 C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGACACATATCCACAC-
AGTAAACAAAAAAGAACANN
 A C G T A C G T A C G T C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGACACATATCCACAC
AYATGYATATGCATR-
 C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AGACACATATCCACAC--
------NWAACCACADNN
 C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AGACACATATCCACAC
AAAGTAAACAAAAATT-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGACACATATCCACAC
GGACACACCCCC----
 C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGACACATATCCACAC-
-------AAACCACAGC
 C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGACACATATCCACAC-
-----SSAATCCACANN
 C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGACACATATCCACAC
CCAGACAG----------
 A C G T A C G T C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AGACACATATCCACAC--
-------AAACCACAGAN
 C G T A A C T G C G T A G A T C G T C A A G T C C G T A A G C T T G C A A G C T T G A C A G T C G T C A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C