Information for 19-CGGCTTCTCCAAA (Motif 39)

A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A C G T A A C T G A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.228e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 29.0bp
Average Position of motif in Background23.3 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGCTTCTCCAAA
--GCTTCC-----
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGGCTTCTCCAAA
----TTTTCCA--
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGGCTTCTCCAAA
-CNGTCCTCCC--
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGGCTTCTCCAAA
---ATTTTCCATT
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGGCTTCTCCAAA--
---TTTCTNAGAAAN
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGGCTTCTCCAAA-
NNNTTTCCTGGAAA
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CGGCTTCTCCAAA
GGGGATTTCC---
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CGGCTTCTCCAAA---
--GGTTCCNNAATTTG
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CGGCTTCTCCAAA
-TKCTGTTCCA--
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CGGCTTCTCCAAA-
----TTATGCAAAT
 A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T