Information for 15-AGCAGGCTCT (Motif 35)

C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T
p-value:1e-6
log p-value:-1.482e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.0 +/- 18.8bp
Average Position of motif in Background57.5 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCAGGCTCT
ANCAGGATGT
 C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGGCTCT
DCTCAGCAGG----
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCAGGCTCT
CACAGCAGGGGG-
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AGCAGGCTCT
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGCAGGCTCT
----NGCTN-
 C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGCAGGCTCT
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGGCTCT
TGCGCAGGCGC-
 A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCAGGCTCT-----------
-YCAGGCWCAGTACCAGGCTC
 C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AGCAGGCTCT
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGGCTCT-
SDGCAGGTGCNS
 A C G T C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C