Information for 12-CAGACCACGA (Motif 30)

A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A
Reverse Opposite:
G A C T A G T C C A T G C A G T C A T G A C T G C G A T G A T C C A G T T C A G
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.703
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.38%
Number of Background Sequences with motif1207.4
Percentage of Background Sequences with motif2.56%
Average Position of motif in Targets51.5 +/- 29.2bp
Average Position of motif in Background50.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGACCACGA
NAAACCACAG
 A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGACCACGA----
CATAAGACCACCATTAC
 A C G T A C G T A C G T A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGACCACGA-
-AAACCGCAAA
 A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAGACCACGA
CNGTCACGCCAC--
 A C G T A C G T A C G T A C G T A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGACCACGA-
-AAACCACANN
 A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGACCACGA--
NWAACCACADNN
 A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCACGA
BCAGACWA---
 A C G T A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGACCACGA
-AAACCGCAA
 A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGACCACGA---
---ANCAGGATGT
 A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCACGA
CCAGACRSVB-
 A C G T A G T C G T C A C T A G G C T A T G A C G T A C G T C A G T A C C T A G C T G A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T