Information for 7-CGGCGTAGDG (Motif 21)

A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
Reverse Opposite:
A G T C G C A T A G T C A C G T C G T A G T A C A T C G A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 26.1bp
Average Position of motif in Background53.8 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dmbx1/MA0883.1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGGCGTAGDG--
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGGCGTAGDG--
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGCGTAGDG
CGGATTAN--
 A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGCGTAGDG
-GGATTAGC-
 A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGTAGDG---
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGGCGTAGDG
AAAAACGGATTATTG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGCGTAGDG
AGGCCTAG--
 A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGCGTAGDG
GGGATTANN-
 A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGTAGDG
GNGGATTAGN-
 A C G T A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGGCGTAGDG
TTGCCCGGATTAGG-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G T A G C A C T G A C G T C G T A C T A G C G T A A C T G
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T