Information for 2-ACAAAGGCTGCATTGT (Motif 2)

C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
Reverse Opposite:
C G T A A G T C C G T A C T G A C G A T T C A G G T A C G C T A A C T G A G T C G T A C G C A T A G C T C G A T T A C G C G A T
p-value:1e-29
log p-value:-6.750e+01
Information Content per bp:1.663
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif41.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets35.0 +/- 18.0bp
Average Position of motif in Background51.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ACAAAGGCTGCATTGT
----AGGVNCCTTTGT
 C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGCTGCATTGT
AACAAAGG---------
 A C G T C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAGGCTGCATTGT
RACAAWGG---------
 A C G T C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGCTGCATTGT
VRRACAAWGG---------
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGCTGCATTGT
AAAACAAAGG---------
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACAAAGGCTGCATTGT
ACAAAG----------
 C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAGGCTGCATTGT
GGAACAAAGR---------
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.60
Offset:9
Orientation:forward strand
Alignment:ACAAAGGCTGCATTGT---
---------CCATTGTTNY
 C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.59
Offset:8
Orientation:forward strand
Alignment:ACAAAGGCTGCATTGT-
--------CTCATTGTC
 C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACAAAGGCTGCATTGT
RAACAATGGN--------
 A C G T A C G T C G T A A G T C C G T A C T G A C G T A C A T G T C A G G T A C C G A T A C T G A G T C C G T A G A C T G C A T C T A G A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T