Information for 6-KCTSARWGAATGG (Motif 14)

A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G C T A C G T A T C G C G T A A C T G G T A C
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 32.9bp
Average Position of motif in Background69.2 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--KCTSARWGAATGG-
ACTATGAATGAATGAT
 A C G T A C G T A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:KCTSARWGAATGG-----
----GGAGAAAGGTGCGA
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KCTSARWGAATGG----
NTTNTATGAATGTGNNC
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KCTSARWGAATGG
---VRAACAATGG
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G
A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:KCTSARWGAATGG-
----RAACAATGGN
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KCTSARWGAATGG---
-CTCACACAATGGCGC
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:KCTSARWGAATGG---
NNNTATTGAATTGNNN
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:KCTSARWGAATGG-----
------TGATTGGCTANN
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:KCTSARWGAATGG
----GAACAATGG
 A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G
A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0005.1_Bbx_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--KCTSARWGAATGG
NANTTCATTGAATTA
 A C G T A C G T A C T G A G T C C G A T A T G C C G T A C T G A C G A T A C T G C G T A C G T A A C G T A C T G A C T G
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A