Information for 4-TCTTTGTTAG (Motif 13)

A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G
Reverse Opposite:
G T A C G C A T T C G A C T G A A G T C G T C A C G T A C G T A C T A G T G C A
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.835
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif163.4
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets54.6 +/- 24.1bp
Average Position of motif in Background51.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TCTTTGTTAG---
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TCTTTGTTAG---
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TCTTTGTTAG
CCWTTGTYYB
 A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTGTTAG----
NCNTTTGTTATTTNN
 A C G T A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCTTTGTTAG
-CTTTGT---
 A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TCTTTGTTAG
YCTTTGTTCC
 A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TCTTTGTTAG
CCWTTGTY--
 A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TCTTTGTTAG--
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCTTTGTTAG
--ATTGTT--
 A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G
A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCTTTGTTAG
CCTTTGTTTT
 A C G T G A T C A C G T A C G T A C G T A C T G A G C T A G C T C G T A C A T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T