p-value: | 1e-8 |
log p-value: | -1.935e+01 |
Information Content per bp: | 1.898 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.48% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 76.0 +/- 3.1bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTCTTTTGCAAAATGY CATTGTTATGCAAAT--- |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTCTTTTGCAAAATGY CTTTGTTATGCAAAT--- |
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PB0145.1_Mafb_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTCTTTTGCAAAATGY ANATTTTTGCAANTN-- |
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POU1F1/MA0784.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTCTTTTGCAAAATGY CTAATTTGCATATT-- |
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PH0144.1_Pou2f2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTCTTTTGCAAAATGY TNTAATTTGCATANNN- |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCTTTTGCAAAATGY ---TTATGCAAAT--- |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTCTTTTGCAAAATGY TTCATTTGCATAT--- |
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CEBPA/MA0102.3/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTCTTTTGCAAAATGY -NATTGTGCAAT---- |
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POU2F1/MA0785.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTTTTGCAAAATGY --AATATGCAAATT-- |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTCTTTTGCAAAATGY TNTAATTTGCATACNA- |
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