Information for 3-TGCTTTTGTTAATCCT (Motif 4)

C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C A T G G T C A A G C T C G A T G C T A G T C A G T A C C G T A C G T A G T C A C G T A C T A G A G T C C G T A
p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.716
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif38.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.2 +/- 29.6bp
Average Position of motif in Background49.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCTTTTGTTAATCCT-----
----NTTGTTAATCCCTCTNN
 C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCTTTTGTTAATCCT
-NCNTTTGTTATTTNN
 C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCTTTTGTTAATCCT
NNNNTTTGTTTACNNT
 C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTTTGTTAATCCT
NNNNTTTTTTTTTNAAC-
 A C G T A C G T C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTTTGTTAATCCT
NTNTTGTTGTTTGTN--
 A C G T C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTTTGTTAATCCT
GNATTTTTTTTTTGANC-
 A C G T A C G T C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCTTTTGTTAATCCT
TTCTATTTTTAGNNN-
 C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TGCTTTTGTTAATCCT-
-------NYTAATCCYB
 C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTTTGTTAATCCT
NNANTTTTATTGGNNN-
 A C G T C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGCTTTTGTTAATCCT
--CCWTTGTY------
 C G A T T C A G A G T C A C G T A C G T G A C T A C G T C A T G A C G T C G A T C G T A C T G A C A G T G A T C A G T C A C G T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T