Information for 4-TACCATTAAAAGC (Motif 5)

A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G A T A C G T C G T A C G T A A C G T A C T G C T A G A C G T C T G A
p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 22.3bp
Average Position of motif in Background58.4 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TACCATTAAAAGC--
CTACCAATAAAATTCT
 A C G T A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TACCATTAAAAGC
--YCATTAMC---
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TACCATTAAAAGC
----ATTAAA---
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TACCATTAAAAGC
--CCAATAAAAA-
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TACCATTAAAAGC
--CCAATAAAAC-
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TACCATTAAAAGC
-NCYAATAAAA--
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TACCATTAAAAGC
-GCAATAAAAA--
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TACCATTAAAAGC
-CCYMATAAAA--
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TACCATTAAAAGC---
TAAGATTATAATACGG
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

BARX1/MA0875.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TACCATTAAAAGC
-GCAATTAG----
 A G C T C G T A A G T C A G T C C G T A A C G T A C G T G T C A C G T A C G T A C G T A A C T G A G T C
A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T