Information for 3-AATTGTATCTTGT (Motif 3)

C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
Reverse Opposite:
T C G A G T A C T C G A T C G A A T C G G C T A G C A T C G T A G T A C C G T A C G T A C G A T A C G T
p-value:1e-13
log p-value:-3.007e+01
Information Content per bp:1.774
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif52.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets52.7 +/- 26.6bp
Average Position of motif in Background46.5 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AATTGTATCTTGT
NNATNAATTGTTTNN---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AATTGTATCTTGT
GGAAAAATTGTTAGGAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATTGTATCTTGT
AAAATTGTTATGAA-
 A C G T A C G T C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AATTGTATCTTGT
-ATTGTTA-----
 C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATTGTATCTTGT
-ATTGTTTAN---
 C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AATTGTATCTTGT
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATTGTATCTTGT
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATTGTATCTTGT
CCATTGTTNY----
 A C G T C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AATTGTATCTTGT---
--TNTTATCTTATCTT
 C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AATTGTATCTTGT
NNNTTAATTGGTTTTT--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G A T A C T G C G A T C G T A C A G T T A G C A C G T A C G T A C T G A G C T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T A C G T