Information for 9-CGTTGACCACAGG (Motif 18)

A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G
Reverse Opposite:
T G A C A T G C A C G T C T A G C G A T C A T G A C T G A C G T G A T C C G T A G T C A A T G C T A C G
p-value:1e-6
log p-value:-1.577e+01
Information Content per bp:1.702
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif91.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets50.4 +/- 27.2bp
Average Position of motif in Background52.7 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CGTTGACCACAGG
---AAACCACAGC
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CGTTGACCACAGG
--NAAACCACAG-
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGTTGACCACAGG-
---AAACCACAGAN
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGTTGACCACAGG-
--NWAACCACADNN
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGTTGACCACAGG
---TGACCTYA--
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CGTTGACCACAGG
-------CACAGN
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGACCACAGG--
NNANTTGACCCCTNNNN
 A C G T A C G T A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGTTGACCACAGG---
--NTGCCCANNGGTNA
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGACCACAGG
CNNTTGACCTTTG-
 A C G T A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGTTGACCACAGG-
--ATGCCCTGAGGC
 A T G C A T C G A C G T C G A T C A T G T C G A G T A C G A T C C G T A A G T C C G T A A T C G A C T G A C G T
A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C